Welcome to MS-Web’s documentation!

MS-Web is the laboratory information and management system of the metabolomics and proteomics facilities at the MPI-IE Freiburg.

The dockerized, django-based web-service offers sample tracking for metabolomics and proteomics experiments, providing researchers and laboratory staff …

MS-Web can be utilized to:

• Upload and track your mass spectrometry experiments
• Download measurement data
• Export related information as Excel spreadsheet
• Start automated software pipelines for data processing

Overview

• Installation
  • Requirements for MS-Web:
  • Building and running docker containers
• Infrastructure
  • Overview scheme:
• Technologies
  • Docker
  • Django (Python3)
  • Git & GitLab
  • PostgreSQL database
  • R & RStudio
  • Ngninx & Gunicorn
• User manual metabolomics app
  • Login
  • Sample submission
  • Overview panels
• User manual proteomics app
  • Login
  • Experiment submission
  • Project submission
  • Sample submission
  • Overview panels
  • Proteomics data management
  • Proteomics file transfer
  • Admin panel
• License
• Help